Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, fhs family, l-fucose permease | SAMN05444145_104140 | Not Available | Positive | 1746198 - 1747502 | 45626.1 |
| lsu ribosomal protein l19p | SAMN05444145_104141 | Not Available | Negative | 1747643 - 1748023 | 14436.9 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN05444145_104142 | Not Available | Positive | 1748277 - 1749047 | 28385.5 |
| signal transduction histidine kinase | SAMN05444145_104143 | Not Available | Positive | 1749081 - 1750055 | 36495.7 |
| two component transcriptional regulator, luxr family | SAMN05444145_104144 | Not Available | Positive | 1750057 - 1750692 | 23324.9 |
| cardiolipin synthase | SAMN05444145_104145 | Not Available | Negative | 1750839 - 1752254 | 53910.3 |
| protein of unknown function | SAMN05444145_104146 | Not Available | Negative | 1752304 - 1753314 | 37643.1 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05444145_104147 | Not Available | Positive | 1753433 - 1754005 | 22055.6 |
| elongation factor p | SAMN05444145_104148 | Not Available | Positive | 1754115 - 1754702 | 22094.4 |
| conserved hypothetical protein | SAMN05444145_104149 | Not Available | Negative | 1754771 - 1756681 | 70327.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
