Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase i | SAMN05444145_104130 | Not Available | Negative | 1733720 - 1736017 | 85562.3 |
| protein of unknown function | SAMN05444145_104131 | Not Available | Negative | 1736096 - 1737802 | 63541.7 |
| starch synthase | SAMN05444145_104132 | Not Available | Negative | 1737786 - 1738592 | 30449.2 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN05444145_104133 | Not Available | Negative | 1738722 - 1739771 | 39830.9 |
| trna pseudouridine55 synthase | SAMN05444145_104134 | Not Available | Negative | 1739834 - 1740559 | 27185.8 |
| undecaprenyl-diphosphatase | SAMN05444145_104135 | Not Available | Negative | 1740565 - 1741350 | 27932.2 |
| protein of unknown function | SAMN05444145_104136 | Not Available | Negative | 1741351 - 1741608 | 9674.03 |
| cell division transport system permease protein | SAMN05444145_104137 | Not Available | Negative | 1741609 - 1742490 | 32072.9 |
| membrane protein yfho | SAMN05444145_104138 | Not Available | Negative | 1742495 - 1745056 | 93618.8 |
| octaprenyl-diphosphate synthase | SAMN05444145_104139 | Not Available | Positive | 1745175 - 1746164 | 36205.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
