Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_10195 | Not Available | Negative | 111066 - 111185 | 4233.21 |
| transposase | SAMN05444145_10196 | Not Available | Negative | 111231 - 112151 | 35454.0 |
| hypothetical protein | SAMN05444145_10197 | Not Available | Positive | 112449 - 115649 | 123513.0 |
| methyltransferase domain-containing protein | SAMN05444145_10198 | Not Available | Negative | 115890 - 116654 | 29134.0 |
| hypothetical protein | SAMN05444145_10199 | Not Available | Negative | 116641 - 117489 | 31781.9 |
| hypothetical protein | SAMN05444145_101100 | Not Available | Positive | 117659 - 119440 | 66595.8 |
| predicted amidohydrolase | SAMN05444145_101101 | Not Available | Positive | 119446 - 120210 | 28185.3 |
| excinuclease abc subunit a | SAMN05444145_101102 | Not Available | Positive | 120276 - 123137 | 106051.0 |
| protein of unknown function | SAMN05444145_101103 | Not Available | Positive | 123190 - 123732 | 20510.7 |
| hypothetical protein | SAMN05444145_101104 | Not Available | Positive | 123735 - 124379 | 24449.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
