Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | SAMN05444145_104110 | Not Available | Positive | 1710429 - 1710884 | 16729.9 |
| ribosomal large subunit pseudouridine synthase d | SAMN05444145_104111 | Not Available | Positive | 1710893 - 1711579 | 25365.4 |
| d-tyrosyl-trna(tyr) deacylase | SAMN05444145_104112 | Not Available | Positive | 1711592 - 1712044 | 16245.5 |
| dna/rna endonuclease g, nuc1 | SAMN05444145_104113 | Not Available | Positive | 1712056 - 1713516 | 53417.1 |
| hypothetical protein | SAMN05444145_104114 | Not Available | Positive | 1713513 - 1714475 | 36916.6 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN05444145_104115 | Not Available | Positive | 1714491 - 1715384 | 31439.5 |
| replication restart dna helicase pria | SAMN05444145_104116 | Not Available | Positive | 1715384 - 1717642 | 83630.0 |
| comf family protein | SAMN05444145_104117 | Not Available | Positive | 1717626 - 1718348 | 26914.5 |
| replicative dna helicase | SAMN05444145_104118 | Not Available | Positive | 1718515 - 1720071 | 57071.3 |
| magnesium chelatase family protein | SAMN05444145_104119 | Not Available | Positive | 1720074 - 1721609 | 54483.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
