Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum formation protein | SAMN05444145_104100 | Not Available | Negative | 1701308 - 1701904 | 22309.9 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444145_104101 | Not Available | Negative | 1701906 - 1702541 | 23637.2 |
| lipid-a-disaccharide synthase | SAMN05444145_104102 | Not Available | Negative | 1702538 - 1703674 | 42846.8 |
| trna (guanine37-n(1)-) methyltransferase | SAMN05444145_104103 | Not Available | Negative | 1703679 - 1704356 | 25581.5 |
| methyltransferase, fkbm family | SAMN05444145_104104 | Not Available | Negative | 1704346 - 1705077 | 27252.0 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444145_104105 | Not Available | Negative | 1705077 - 1705745 | 24594.1 |
| acetyl esterase/lipase | SAMN05444145_104106 | Not Available | Positive | 1705838 - 1706680 | 31221.6 |
| hypothetical protein | SAMN05444145_104107 | Not Available | Positive | 1706691 - 1707824 | 41531.7 |
| 23s rrna m(5)u-1939 methyltransferase | SAMN05444145_104108 | Not Available | Positive | 1707858 - 1709276 | 53261.9 |
| hypothetical protein | SAMN05444145_104109 | Not Available | Positive | 1709345 - 1710037 | 25480.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
