Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_10490 | Not Available | Positive | 1683807 - 1684928 | 41361.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_10491 | Not Available | Positive | 1684974 - 1688084 | 115447.0 |
| starch-binding associating with outer membrane | SAMN05444145_10492 | Not Available | Positive | 1688119 - 1689627 | 57582.8 |
| hypothetical protein | SAMN05444145_10493 | Not Available | Positive | 1689648 - 1692194 | 91961.2 |
| hypothetical protein | SAMN05444145_10494 | Not Available | Positive | 1692271 - 1694751 | 92197.5 |
| hexosaminidase | SAMN05444145_10495 | Not Available | Positive | 1694832 - 1696418 | 60364.9 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444145_10496 | Not Available | Positive | 1696437 - 1697318 | 33759.4 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05444145_10497 | Not Available | Positive | 1697330 - 1699000 | 61632.3 |
| Trna-leu | Not Available | Not Available | Positive | 1699108 - 1699196 | Not Available |
| peptidase s46 | SAMN05444145_10499 | Not Available | Negative | 1699332 - 1701311 | 74164.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
