Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | SAMN05444145_10480 | Not Available | Negative | 1669247 - 1669813 | 22132.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444145_10481 | Not Available | Negative | 1670011 - 1670526 | 19842.8 |
| hexosaminidase | SAMN05444145_10482 | Not Available | Negative | 1670646 - 1672223 | 59853.9 |
| protein of unknown function | SAMN05444145_10483 | Not Available | Negative | 1672283 - 1673362 | 39405.5 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444145_10484 | Not Available | Negative | 1673400 - 1674269 | 32213.0 |
| starch-binding associating with outer membrane | SAMN05444145_10485 | Not Available | Negative | 1674289 - 1676055 | 66689.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_10486 | Not Available | Negative | 1676075 - 1679581 | 132222.0 |
| fecr family protein | SAMN05444145_10487 | Not Available | Negative | 1679701 - 1680705 | 37873.7 |
| hypothetical protein | SAMN05444145_10488 | Not Available | Positive | 1680754 - 1680867 | 4393.66 |
| endonuclease/exonuclease/phosphatase family protein | SAMN05444145_10489 | Not Available | Positive | 1681257 - 1683764 | 90680.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
