Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_10470 | Not Available | Negative | 1658117 - 1659085 | 36734.0 |
| protein of unknown function duf58 | SAMN05444145_10471 | Not Available | Negative | 1659082 - 1659966 | 33595.2 |
| moxr-like atpase | SAMN05444145_10472 | Not Available | Negative | 1659969 - 1660967 | 37113.1 |
| atp-dependent dna helicase pcra | SAMN05444145_10473 | Not Available | Positive | 1661077 - 1663608 | 95073.6 |
| glycosyl transferase family 2 | SAMN05444145_10474 | Not Available | Positive | 1663614 - 1664537 | 35932.8 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN05444145_10475 | Not Available | Positive | 1664542 - 1665204 | 24843.1 |
| hypothetical protein | SAMN05444145_10476 | Not Available | Positive | 1665201 - 1665977 | 29424.6 |
| phosphoesterase recj domain-containing protein | SAMN05444145_10477 | Not Available | Positive | 1666114 - 1667145 | 38415.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05444145_10478 | Not Available | Positive | 1667150 - 1668037 | 32517.1 |
| conserved hypothetical integral membrane protein | SAMN05444145_10479 | Not Available | Positive | 1668167 - 1669237 | 37962.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
