Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin-a associated anchor protein mfa1 and mfa2 | SAMN05444145_10459 | Not Available | Positive | 1643433 - 1644344 | 33260.2 |
| hypothetical protein | SAMN05444145_10460 | Not Available | Positive | 1644369 - 1647305 | 104204.0 |
| hypothetical protein | SAMN05444145_10461 | Not Available | Positive | 1647326 - 1650370 | 109001.0 |
| hypothetical protein | SAMN05444145_10462 | Not Available | Positive | 1650375 - 1651559 | 43499.3 |
| hypothetical protein | SAMN05444145_10463 | Not Available | Positive | 1651581 - 1651787 | 7637.5 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05444145_10464 | Not Available | Negative | 1651771 - 1653228 | 52533.4 |
| aldehyde dehydrogenase (nad+) | SAMN05444145_10466 | Not Available | Negative | 1653863 - 1655245 | 51450.2 |
| ca-activated chloride channel family protein | SAMN05444145_10467 | Not Available | Negative | 1655304 - 1656329 | 37915.4 |
| ca-activated chloride channel family protein | SAMN05444145_10468 | Not Available | Negative | 1656343 - 1657329 | 36015.9 |
| tetratricopeptide repeat-containing protein | SAMN05444145_10469 | Not Available | Negative | 1657343 - 1658104 | 28998.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
