Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage integrase sam-like domain-containing protein | SAMN05444145_10439 | Not Available | Negative | 1614642 - 1615958 | 50993.1 |
| hypothetical protein | SAMN05444145_10440 | Not Available | Negative | 1616220 - 1617191 | 34245.8 |
| uncharacterized protein | SAMN05444145_10441 | Not Available | Negative | 1617304 - 1619421 | 77405.8 |
| sugar phosphate isomerase/epimerase | SAMN05444145_10442 | Not Available | Negative | 1619747 - 1620652 | 33780.5 |
| protein of unknown function | SAMN05444145_10443 | Not Available | Negative | 1620665 - 1621543 | 32345.0 |
| oxidoreductase family, nad-binding rossmann fold | SAMN05444145_10444 | Not Available | Negative | 1621581 - 1623056 | 54466.4 |
| sec-independent protein translocase protein tata | SAMN05444145_10445 | Not Available | Negative | 1623091 - 1623255 | 5941.66 |
| myo-inositol 2-dehydrogenase / d-chiro-inositol 1-dehydrogenase | SAMN05444145_10446 | Not Available | Negative | 1623287 - 1624360 | 40458.3 |
| hypothetical protein | SAMN05444145_10447 | Not Available | Negative | 1624585 - 1626198 | 62891.6 |
| alpha-galactosidase | SAMN05444145_10448 | Not Available | Negative | 1626206 - 1628407 | 82117.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
