Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction enzyme, s subunit | SAMN05444145_10429 | Not Available | Negative | 1604504 - 1605748 | 47233.7 |
| hypothetical protein | SAMN05444145_10430 | Not Available | Negative | 1605763 - 1606497 | 28187.4 |
| hypothetical protein | SAMN05444145_10431 | Not Available | Negative | 1606494 - 1606934 | 16828.2 |
| type i restriction enzyme m protein | SAMN05444145_10432 | Not Available | Negative | 1606945 - 1608471 | 57581.9 |
| type i restriction modification dna specificity domain-containing protein | SAMN05444145_10433 | Not Available | Negative | 1608461 - 1609027 | 20986.4 |
| plasmid recombination enzyme | SAMN05444145_10434 | Not Available | Negative | 1609206 - 1610630 | 54146.3 |
| chc2 zinc finger | SAMN05444145_10435 | Not Available | Negative | 1610876 - 1611760 | 33001.6 |
| dna binding domain-containing protein, excisionase family | SAMN05444145_10436 | Not Available | Negative | 1611763 - 1612053 | 11193.6 |
| hypothetical protein | SAMN05444145_10437 | Not Available | Negative | 1612298 - 1612702 | 15751.9 |
| predicted transcriptional regulator, contains hth domain | SAMN05444145_10438 | Not Available | Negative | 1612709 - 1614586 | 70944.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
