Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein family | SAMN05444145_10185 | Not Available | Negative | 104423 - 104674 | 8789.19 |
| uncharacterized protein tigr03905 | SAMN05444145_10186 | Not Available | Negative | 104727 - 104975 | 8653.56 |
| preprotein translocase subunit yajc | SAMN05444145_10187 | Not Available | Negative | 105048 - 105368 | 12274.3 |
| protein of unknown function | SAMN05444145_10188 | Not Available | Negative | 105533 - 105946 | 14838.8 |
| nusb antitermination factor | SAMN05444145_10189 | Not Available | Negative | 105960 - 106898 | 36032.4 |
| hypothetical protein | SAMN05444145_10190 | Not Available | Positive | 106958 - 108262 | 48187.4 |
| hypothetical protein | SAMN05444145_10191 | Not Available | Positive | 108268 - 108780 | 19061.1 |
| cob(i)alamin adenosyltransferase | SAMN05444145_10192 | Not Available | Positive | 108777 - 109331 | 20233.2 |
| protein of unknown function | SAMN05444145_10193 | Not Available | Positive | 109494 - 109715 | 8666.8 |
| hypothetical protein | SAMN05444145_10194 | Not Available | Negative | 110001 - 110813 | 29225.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
