Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transport protein exbd/tolr | SAMN05444145_10419 | Not Available | Negative | 1594257 - 1594862 | 22917.4 |
| hypothetical protein | SAMN05444145_10420 | Not Available | Negative | 1594874 - 1595293 | 14367.2 |
| biopolymer transport protein exbb | SAMN05444145_10421 | Not Available | Negative | 1595325 - 1596077 | 26675.9 |
| asparaginase | SAMN05444145_10422 | Not Available | Negative | 1596428 - 1597456 | 37300.2 |
| tatd dnase family protein | SAMN05444145_10423 | Not Available | Negative | 1597461 - 1598255 | 29902.6 |
| dna processing protein | SAMN05444145_10424 | Not Available | Negative | 1598252 - 1599352 | 38800.6 |
| Trna-cys | Not Available | Not Available | Positive | 1599548 - 1599618 | Not Available |
| hypothetical protein | SAMN05444145_10426 | Not Available | Negative | 1599722 - 1600417 | 27195.1 |
| type i restriction enzyme, r subunit | SAMN05444145_10427 | Not Available | Negative | 1600417 - 1603629 | 123649.0 |
| phosphoserine phosphatase | SAMN05444145_10428 | Not Available | Negative | 1603633 - 1604499 | 33040.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
