Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative binding domain-containing protein, n-terminal | SAMN05444145_1049 | Not Available | Negative | 1585238 - 1585585 | 12102.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444145_10410 | Not Available | Positive | 1585774 - 1586325 | 21195.4 |
| single-stranded-dna-specific exonuclease | SAMN05444145_10411 | Not Available | Negative | 1586386 - 1588152 | 65604.4 |
| lipoyl(octanoyl) transferase | SAMN05444145_10412 | Not Available | Negative | 1588336 - 1589046 | 25593.9 |
| lipoic acid synthetase | SAMN05444145_10413 | Not Available | Negative | 1589049 - 1589930 | 32929.8 |
| hypothetical protein | SAMN05444145_10414 | Not Available | Positive | 1590278 - 1590721 | 16978.3 |
| arac-like ligand binding domain-containing protein | SAMN05444145_10415 | Not Available | Negative | 1590972 - 1591895 | 36060.0 |
| hypothetical protein | SAMN05444145_10416 | Not Available | Negative | 1592044 - 1593066 | 35763.1 |
| rnase hii | SAMN05444145_10417 | Not Available | Positive | 1593131 - 1593730 | 22603.9 |
| biopolymer transport protein exbd | SAMN05444145_10418 | Not Available | Negative | 1593783 - 1594253 | 17486.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
