Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-terminus of esterase_sgnh_hydro-type | SAMN05444145_103317 | Not Available | Negative | 1572062 - 1573144 | 40229.4 |
| mfs transporter, opa family, sugar phosphate sensor protein uhpc | SAMN05444145_103318 | Not Available | Negative | 1573141 - 1573470 | 11389.0 |
| mfs transporter, opa family, sugar phosphate sensor protein uhpc | SAMN05444145_1041 | Not Available | Negative | 1573471 - 1573652 | 7166.77 |
| glycerophosphoryl diester phosphodiesterase | SAMN05444145_1042 | Not Available | Negative | 1573657 - 1574574 | 33585.7 |
| hypothetical protein | SAMN05444145_1043 | Not Available | Negative | 1574671 - 1576374 | 61409.2 |
| sugar phosphate isomerase/epimerase | SAMN05444145_1044 | Not Available | Negative | 1576385 - 1577251 | 32652.5 |
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN05444145_1045 | Not Available | Negative | 1577261 - 1579279 | 71974.7 |
| starch-binding associating with outer membrane | SAMN05444145_1046 | Not Available | Negative | 1579304 - 1580692 | 52513.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_1047 | Not Available | Negative | 1580711 - 1584130 | 126002.0 |
| fecr family protein | SAMN05444145_1048 | Not Available | Negative | 1584232 - 1585209 | 37476.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
