Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05444145_103307 | Not Available | Positive | 1559092 - 1560735 | 60781.4 |
| hypothetical protein | SAMN05444145_103308 | Not Available | Positive | 1560754 - 1561707 | 35203.2 |
| hypothetical protein | SAMN05444145_103309 | Not Available | Positive | 1561729 - 1564416 | 90784.9 |
| glycosyl hydrolase catalytic core | SAMN05444145_103310 | Not Available | Positive | 1564442 - 1565344 | 33975.4 |
| beta-glucuronidase | SAMN05444145_103311 | Not Available | Positive | 1565350 - 1567149 | 69656.5 |
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN05444145_103312 | Not Available | Positive | 1567149 - 1568393 | 47571.3 |
| protein of unknown function | SAMN05444145_103313 | Not Available | Positive | 1568599 - 1569240 | 24469.4 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444145_103314 | Not Available | Positive | 1569267 - 1569893 | 23004.4 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05444145_103315 | Not Available | Positive | 1570158 - 1570937 | 29050.8 |
| l-glyceraldehyde 3-phosphate reductase | SAMN05444145_103316 | Not Available | Negative | 1571005 - 1572009 | 37630.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
