Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | SAMN05444145_103297 | Not Available | Negative | 1545340 - 1545870 | 19124.9 |
| phosphoserine phosphatase | SAMN05444145_103298 | Not Available | Positive | 1546031 - 1546870 | 31925.2 |
| hypothetical protein | SAMN05444145_103299 | Not Available | Positive | 1546872 - 1547453 | 20883.8 |
| abc-2 type transport system atp-binding protein/atp-binding cassette, subfamily f, uup | SAMN05444145_103300 | Not Available | Positive | 1547440 - 1548090 | 23427.6 |
| xtp/ditp diphosphohydrolase | SAMN05444145_103301 | Not Available | Positive | 1548116 - 1548697 | 21214.9 |
| predicted dehydrogenase | SAMN05444145_103302 | Not Available | Positive | 1548702 - 1549679 | 35493.5 |
| gtp cyclohydrolase i | SAMN05444145_103303 | Not Available | Positive | 1549699 - 1550307 | 23372.5 |
| pas domain s-box-containing protein | SAMN05444145_103304 | Not Available | Negative | 1550366 - 1552684 | 88049.3 |
| hypothetical protein | SAMN05444145_103305 | Not Available | Negative | 1552838 - 1555675 | 106672.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_103306 | Not Available | Positive | 1555964 - 1559074 | 112292.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
