Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| solute:na+ symporter, sss family | SAMN05444145_103287 | Not Available | Negative | 1529496 - 1530983 | 53917.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444145_103288 | Not Available | Negative | 1531016 - 1531927 | 33098.1 |
| acetyl esterase/lipase | SAMN05444145_103289 | Not Available | Negative | 1531950 - 1532825 | 32411.8 |
| repeat domain-containing protein | SAMN05444145_103290 | Not Available | Negative | 1532822 - 1534882 | 75994.1 |
| transcriptional regulator, laci family | SAMN05444145_103291 | Not Available | Negative | 1534932 - 1535990 | 39728.6 |
| hypothetical protein | SAMN05444145_103292 | Not Available | Positive | 1536106 - 1537245 | 40933.1 |
| l-ribulokinase | SAMN05444145_103293 | Not Available | Positive | 1537257 - 1538882 | 58494.7 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN05444145_103294 | Not Available | Positive | 1539124 - 1539576 | 16686.9 |
| dna polymerase i | SAMN05444145_103295 | Not Available | Positive | 1539613 - 1542489 | 107730.0 |
| hypothetical protein | SAMN05444145_103296 | Not Available | Negative | 1542543 - 1545299 | 103156.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
