Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN05444145_103267 | Not Available | Positive | 1496019 - 1497809 | 67963.0 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN05444145_103268 | Not Available | Positive | 1497817 - 1498941 | 42721.4 |
| rrna maturation rnase ybey | SAMN05444145_103269 | Not Available | Positive | 1499015 - 1499449 | 16983.2 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN05444145_103270 | Not Available | Positive | 1499446 - 1501404 | 73111.1 |
| branched-chain amino acid aminotransferase | SAMN05444145_103271 | Not Available | Negative | 1501510 - 1502523 | 37517.0 |
| methionyl-trna synthetase | SAMN05444145_103272 | Not Available | Negative | 1502573 - 1504615 | 76412.3 |
| peptidase s46 | SAMN05444145_103273 | Not Available | Negative | 1504765 - 1506861 | 77815.8 |
| quinolinate synthetase | SAMN05444145_103274 | Not Available | Negative | 1506934 - 1507875 | 34367.3 |
| atp-binding protein involved in chromosome partitioning | SAMN05444145_103275 | Not Available | Negative | 1508264 - 1509316 | 37526.5 |
| protease-4 | SAMN05444145_103276 | Not Available | Positive | 1509484 - 1511250 | 64045.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
