Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_103257 | Not Available | Positive | 1480380 - 1481897 | 56858.6 |
| hypothetical protein | SAMN05444145_103258 | Not Available | Negative | 1482077 - 1482268 | 7133.53 |
| two-component system, ntrc family, response regulator hydg | SAMN05444145_103259 | Not Available | Negative | 1482514 - 1483869 | 48931.8 |
| hpt domain-containing protein | SAMN05444145_103260 | Not Available | Negative | 1483874 - 1486285 | 87997.1 |
| abc-2 type transport system atp-binding protein | SAMN05444145_103261 | Not Available | Positive | 1486514 - 1487434 | 34538.8 |
| abc-2 type transport system permease protein | SAMN05444145_103262 | Not Available | Positive | 1487447 - 1488769 | 49221.2 |
| phosphoglycerate kinase | SAMN05444145_103263 | Not Available | Positive | 1488879 - 1490141 | 44951.4 |
| putative endopeptidase | SAMN05444145_103264 | Not Available | Positive | 1490226 - 1492334 | 78347.5 |
| nte family protein | SAMN05444145_103265 | Not Available | Negative | 1492607 - 1494904 | 86664.7 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN05444145_103266 | Not Available | Positive | 1494981 - 1496006 | 38856.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
