Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444145_10175 | Not Available | Positive | 93361 - 94506 | 43546.5 |
| nitrate/nitrite transporter nark | SAMN05444145_10176 | Not Available | Negative | 94574 - 95962 | 50960.7 |
| tetratricopeptide repeat-containing protein | SAMN05444145_10177 | Not Available | Negative | 95979 - 97967 | 76401.9 |
| gtp-binding protein era | SAMN05444145_10178 | Not Available | Negative | 98014 - 98895 | 33182.1 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN05444145_10179 | Not Available | Negative | 99518 - 100849 | 48902.9 |
| protein of unknown function | SAMN05444145_10180 | Not Available | Negative | 100923 - 101501 | 22423.4 |
| predicted thioesterase | SAMN05444145_10181 | Not Available | Positive | 101573 - 101947 | 12579.3 |
| vancomycin resistance protein vanw | SAMN05444145_10182 | Not Available | Positive | 101950 - 102777 | 32316.9 |
| sodium/proton antiporter, nhad family | SAMN05444145_10183 | Not Available | Negative | 102814 - 104148 | 48151.6 |
| Trna-gln | Not Available | Not Available | Positive | 104305 - 104375 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
