Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein 95 | SAMN05444145_103237 | Not Available | Positive | 1456867 - 1458051 | 44220.1 |
| membrane protein | SAMN05444145_103238 | Not Available | Positive | 1458082 - 1459386 | 49378.2 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN05444145_103239 | Not Available | Positive | 1459407 - 1460186 | 28214.0 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN05444145_103240 | Not Available | Positive | 1460162 - 1460707 | 19941.8 |
| beta-galactosidase | SAMN05444145_103241 | Not Available | Positive | 1460805 - 1463918 | 117881.0 |
| lrp/asnc family transcriptional regulator, regulator for asna, asnc and gida | SAMN05444145_103242 | Not Available | Negative | 1463979 - 1464452 | 17849.1 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN05444145_103243 | Not Available | Negative | 1464461 - 1465648 | 43373.2 |
| udp-galactose 4-epimerase | SAMN05444145_103244 | Not Available | Positive | 1465875 - 1466903 | 37445.9 |
| lsu ribosomal protein l25p | SAMN05444145_103245 | Not Available | Positive | 1467027 - 1467599 | 20504.2 |
| peptidyl-trna hydrolase, pth1 family | SAMN05444145_103246 | Not Available | Positive | 1467608 - 1468171 | 20614.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
