Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_103217 | Not Available | Positive | 1432375 - 1433352 | 36478.0 |
| phage portal protein | SAMN05444145_103218 | Not Available | Positive | 1433421 - 1434647 | 46152.4 |
| hypothetical protein | SAMN05444145_103219 | Not Available | Positive | 1434644 - 1435117 | 17390.8 |
| phage-related holin (lysis protein) | SAMN05444145_103220 | Not Available | Positive | 1435092 - 1435517 | 15646.1 |
| hypothetical protein | SAMN05444145_103221 | Not Available | Positive | 1435510 - 1435911 | 14952.7 |
| predicted acyltransferase | SAMN05444145_103222 | Not Available | Negative | 1435960 - 1437138 | 43477.0 |
| glycosyl hydrolases family 18 | SAMN05444145_103223 | Not Available | Negative | 1437151 - 1438200 | 37700.4 |
| pkd-like domain-containing protein | SAMN05444145_103224 | Not Available | Negative | 1438211 - 1439599 | 50839.5 |
| hexosaminidase | SAMN05444145_103225 | Not Available | Negative | 1439633 - 1441234 | 60336.2 |
| glycosyl hydrolase family 20, catalytic domain | SAMN05444145_103226 | Not Available | Negative | 1441236 - 1442792 | 59209.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
