Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit delta' | SAMN05444145_103207 | Not Available | Negative | 1421108 - 1422253 | 42761.5 |
| hypothetical protein | SAMN05444145_103208 | Not Available | Negative | 1422255 - 1422440 | 6505.29 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05444145_103209 | Not Available | Negative | 1422443 - 1423912 | 54432.5 |
| magnesium transporter | SAMN05444145_103210 | Not Available | Negative | 1424159 - 1425142 | 38016.9 |
| menaquinone biosynthesis | SAMN05444145_103211 | Not Available | Negative | 1425212 - 1425766 | 19972.8 |
| alpha-galactosidase | SAMN05444145_103212 | Not Available | Negative | 1425920 - 1427143 | 46151.8 |
| hypothetical protein | SAMN05444145_103213 | Not Available | Positive | 1427646 - 1428650 | 34934.3 |
| hypothetical protein | SAMN05444145_103214 | Not Available | Positive | 1428641 - 1430992 | 86064.5 |
| hypothetical protein | SAMN05444145_103215 | Not Available | Positive | 1430992 - 1431258 | 10044.0 |
| atp-dependent protease clpp, protease subunit | SAMN05444145_103216 | Not Available | Positive | 1431255 - 1432127 | 31284.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
