Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l11 methyltransferase | SAMN05444145_103197 | Not Available | Negative | 1412157 - 1412987 | 29571.2 |
| tyrosine recombinase xerd subunit | SAMN05444145_103198 | Not Available | Positive | 1413057 - 1413953 | 34555.9 |
| hypothetical protein | SAMN05444145_103199 | Not Available | Negative | 1413974 - 1414327 | 12716.3 |
| protein of unknown function | SAMN05444145_103200 | Not Available | Negative | 1414287 - 1415114 | 31603.7 |
| lipoprotein-releasing system permease protein | SAMN05444145_103201 | Not Available | Negative | 1415116 - 1416321 | 43275.7 |
| ribosome-binding factor a | SAMN05444145_103202 | Not Available | Negative | 1416442 - 1416783 | 13275.8 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444145_103203 | Not Available | Negative | 1416796 - 1417605 | 31008.7 |
| ig-like domain-containing protein | SAMN05444145_103204 | Not Available | Negative | 1417607 - 1419643 | 78015.2 |
| hypothetical protein | SAMN05444145_103205 | Not Available | Negative | 1419640 - 1420608 | 35990.1 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN05444145_103206 | Not Available | Negative | 1420616 - 1421104 | 17899.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
