Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05444145_103187 | Not Available | Negative | 1401035 - 1402189 | 44483.3 |
| queuine trna-ribosyltransferase | SAMN05444145_103188 | Not Available | Positive | 1402249 - 1403379 | 42172.5 |
| lipopolysaccharide export system permease protein | SAMN05444145_103189 | Not Available | Positive | 1403383 - 1404486 | 42677.1 |
| pasta domain, binds beta-lactams | SAMN05444145_103190 | Not Available | Positive | 1404497 - 1405453 | 35012.1 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN05444145_103191 | Not Available | Positive | 1405453 - 1406535 | 41079.8 |
| uncharacterized radical sam protein ygiq | SAMN05444145_103192 | Not Available | Positive | 1406550 - 1408319 | 66858.2 |
| conserved hypothetical integral membrane protein | SAMN05444145_103193 | Not Available | Negative | 1408417 - 1409694 | 46149.0 |
| phosphate-selective porin o and p | SAMN05444145_103194 | Not Available | Negative | 1409847 - 1410902 | 39309.1 |
| hypothetical protein | SAMN05444145_103195 | Not Available | Negative | 1411025 - 1411390 | 13411.2 |
| dna replication and repair protein reco | SAMN05444145_103196 | Not Available | Negative | 1411435 - 1412160 | 27511.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
