Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator of cell morphogenesis and no signaling | SAMN05444145_103177 | Not Available | Negative | 1391686 - 1392618 | 34669.7 |
| phosphoglycerol transferase mdob | SAMN05444145_103178 | Not Available | Negative | 1392694 - 1394529 | 67569.2 |
| uracil phosphoribosyltransferase | SAMN05444145_103179 | Not Available | Negative | 1394667 - 1395323 | 24133.1 |
| gtp-binding protein hflx | SAMN05444145_103180 | Not Available | Negative | 1395346 - 1396581 | 47063.3 |
| protein tonb | SAMN05444145_103181 | Not Available | Negative | 1396700 - 1397323 | 23683.5 |
| outer membrane transport energization protein tonb | SAMN05444145_103182 | Not Available | Negative | 1397475 - 1398158 | 25755.9 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN05444145_103183 | Not Available | Positive | 1398317 - 1399339 | 38011.9 |
| thioredoxin-like | SAMN05444145_103184 | Not Available | Positive | 1399399 - 1399836 | 16473.3 |
| 16s rrna m(7)g-527 methyltransferase | SAMN05444145_103185 | Not Available | Negative | 1399853 - 1400476 | 23512.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444145_103186 | Not Available | Negative | 1400481 - 1401044 | 22105.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
