Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase | SAMN05444145_103167 | Not Available | Positive | 1383142 - 1383843 | 26053.6 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN05444145_103168 | Not Available | Positive | 1383941 - 1384822 | 32399.9 |
| hypothetical protein | SAMN05444145_103169 | Not Available | Positive | 1384834 - 1385304 | 18119.3 |
| carboxyl-terminal processing protease | SAMN05444145_103170 | Not Available | Positive | 1385297 - 1386958 | 61413.2 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05444145_103171 | Not Available | Positive | 1386968 - 1388143 | 44393.7 |
| protein of unknown function | SAMN05444145_103172 | Not Available | Positive | 1388143 - 1389087 | 33545.1 |
| uroporphyrinogen-iii synthase | SAMN05444145_103173 | Not Available | Positive | 1389121 - 1389984 | 32153.3 |
| ribonuclease p protein component | SAMN05444145_103174 | Not Available | Positive | 1390010 - 1390378 | 14234.3 |
| hypothetical protein | SAMN05444145_103175 | Not Available | Positive | 1390335 - 1390595 | 9828.07 |
| cobalt-zinc-cadmium efflux system protein | SAMN05444145_103176 | Not Available | Negative | 1390796 - 1391689 | 31843.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
