Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444145_103147 | Not Available | Positive | 1356520 - 1357662 | 42733.5 |
| transferase hexapeptide (six repeat-containing protein) | SAMN05444145_103148 | Not Available | Positive | 1357659 - 1358264 | 22489.4 |
| hypothetical protein | SAMN05444145_103149 | Not Available | Positive | 1358266 - 1359357 | 41003.1 |
| polysaccharide transporter, pst family | SAMN05444145_103150 | Not Available | Positive | 1359338 - 1360816 | 54098.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444145_103151 | Not Available | Positive | 1360823 - 1361956 | 42537.4 |
| glycosyltransferase sugar-binding region containing dxd motif-containing protein | SAMN05444145_103152 | Not Available | Positive | 1361953 - 1362699 | 29097.0 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05444145_103153 | Not Available | Positive | 1362710 - 1363882 | 43602.1 |
| two-component system, unclassified family, sensor histidine kinase and response regulator | SAMN05444145_103154 | Not Available | Positive | 1363940 - 1365106 | 43059.8 |
| uncharacterized conserved protein yafd, endonuclease/exonuclease/phosphatase (eep) superfamily | SAMN05444145_103155 | Not Available | Negative | 1365096 - 1366142 | 39117.4 |
| udp-glucuronate decarboxylase | SAMN05444145_103156 | Not Available | Positive | 1366250 - 1367209 | 36196.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
