Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine protease do | SAMN05444145_103137 | Not Available | Positive | 1343513 - 1344595 | 39929.0 |
| rhomboid protease glup | SAMN05444145_103138 | Not Available | Positive | 1344611 - 1345954 | 50031.8 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05444145_103139 | Not Available | Negative | 1346042 - 1348030 | 74133.3 |
| response regulator receiver domain-containing protein | SAMN05444145_103140 | Not Available | Positive | 1348358 - 1348726 | 14272.5 |
| sugar transferase | SAMN05444145_103141 | Not Available | Positive | 1348723 - 1349895 | 44243.3 |
| outer membrane efflux protein | SAMN05444145_103142 | Not Available | Positive | 1349899 - 1350708 | 30434.4 |
| atp synthase f1 subcomplex epsilon subunit | SAMN05444145_103143 | Not Available | Positive | 1350721 - 1352910 | 83939.2 |
| o-antigen ligase | SAMN05444145_103144 | Not Available | Positive | 1352935 - 1354446 | 54868.8 |
| hypothetical protein | SAMN05444145_103145 | Not Available | Positive | 1354443 - 1355333 | 33124.6 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05444145_103146 | Not Available | Positive | 1355330 - 1356523 | 44117.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
