Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_103127 | Not Available | Negative | 1331767 - 1332645 | 32455.4 |
| hypothetical protein | SAMN05444145_103128 | Not Available | Negative | 1332656 - 1333462 | 29335.0 |
| protein of unknown function | SAMN05444145_103129 | Not Available | Negative | 1333473 - 1335638 | 78945.3 |
| protein of unknown function | SAMN05444145_103130 | Not Available | Negative | 1335653 - 1337338 | 61024.9 |
| protein of unknown function | SAMN05444145_103131 | Not Available | Negative | 1337395 - 1338270 | 32151.9 |
| hypothetical protein | SAMN05444145_103132 | Not Available | Negative | 1338270 - 1340030 | 63794.4 |
| transcriptional regulator, tetr family | SAMN05444145_103133 | Not Available | Positive | 1340230 - 1340832 | 23353.1 |
| hypothetical protein | SAMN05444145_103134 | Not Available | Positive | 1340945 - 1341400 | 16945.8 |
| hypothetical protein | SAMN05444145_103135 | Not Available | Positive | 1341499 - 1342140 | 23402.4 |
| hypothetical protein | SAMN05444145_103136 | Not Available | Positive | 1342151 - 1343491 | 51003.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
