Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN05444145_103117 | Not Available | Negative | 1315291 - 1316184 | 34051.0 |
| pkd-like family protein | SAMN05444145_103118 | Not Available | Negative | 1316217 - 1317752 | 56427.5 |
| protein of unknown function | SAMN05444145_103119 | Not Available | Negative | 1317772 - 1318491 | 27552.3 |
| susd family protein | SAMN05444145_103120 | Not Available | Negative | 1318505 - 1319905 | 53068.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_103121 | Not Available | Negative | 1319951 - 1323355 | 126145.0 |
| susd family protein | SAMN05444145_103122 | Not Available | Negative | 1323371 - 1324849 | 55229.4 |
| outer membrane receptor proteins, mostly fe transport | SAMN05444145_103123 | Not Available | Negative | 1324870 - 1327548 | 99276.7 |
| fecr family protein | SAMN05444145_103124 | Not Available | Negative | 1327604 - 1328791 | 45240.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444145_103125 | Not Available | Negative | 1328982 - 1329494 | 20026.0 |
| putative carbohydrate metabolism domain-containing protein | SAMN05444145_103126 | Not Available | Negative | 1330121 - 1331770 | 60390.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
