Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylneuraminate lyase | SAMN05444145_10377 | Not Available | Positive | 1259910 - 1260824 | 32874.7 |
| transporter, sss family | SAMN05444145_10378 | Not Available | Positive | 1260851 - 1263406 | 91941.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_10379 | Not Available | Positive | 1263502 - 1266720 | 118975.0 |
| susd family protein | SAMN05444145_10380 | Not Available | Positive | 1266743 - 1268212 | 55467.8 |
| sialidase-1 | SAMN05444145_10381 | Not Available | Positive | 1268226 - 1269509 | 47240.5 |
| major paralogous domain-containing protein | SAMN05444145_10382 | Not Available | Positive | 1269522 - 1271762 | 80120.0 |
| calcineurin-like phosphoesterase | SAMN05444145_10383 | Not Available | Positive | 1271834 - 1273390 | 59293.6 |
| dna-binding transcriptional regulator, fadr family | SAMN05444145_10384 | Not Available | Positive | 1273478 - 1274194 | 27631.7 |
| sialidase-1 | SAMN05444145_10385 | Not Available | Positive | 1274256 - 1275413 | 42478.9 |
| arylsulfatase | SAMN05444145_10386 | Not Available | Positive | 1275410 - 1277080 | 63001.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
