Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro aminopeptidase | SAMN05444145_10367 | Not Available | Positive | 1248951 - 1250342 | 51128.4 |
| hypothetical protein | SAMN05444145_10368 | Not Available | Positive | 1250367 - 1250597 | 8551.71 |
| lysophospholipase l1 | SAMN05444145_10369 | Not Available | Positive | 1250605 - 1251273 | 24064.9 |
| translation elongation factor 2 (ef-2/ef-g) | SAMN05444145_10370 | Not Available | Positive | 1251445 - 1253607 | 80316.2 |
| phosphate transporter family protein | SAMN05444145_10371 | Not Available | Positive | 1253913 - 1256138 | 81941.7 |
| protein of unknown function | SAMN05444145_10372 | Not Available | Positive | 1256138 - 1256701 | 21639.2 |
| ribosomal protein s18 acetylase rimi | SAMN05444145_10373 | Not Available | Negative | 1256726 - 1257223 | 19212.3 |
| lsu ribosomal protein l34p | SAMN05444145_10374 | Not Available | Negative | 1257367 - 1257534 | 6397.93 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN05444145_10375 | Not Available | Positive | 1257775 - 1259100 | 48817.8 |
| thymidine kinase | SAMN05444145_10376 | Not Available | Positive | 1259189 - 1259758 | 21362.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
