Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recg | SAMN05444145_10357 | Not Available | Positive | 1236652 - 1238826 | 81180.4 |
| protein of unknown function | SAMN05444145_10358 | Not Available | Positive | 1238904 - 1239701 | 30852.9 |
| hypothetical protein | SAMN05444145_10359 | Not Available | Positive | 1239817 - 1240752 | 35395.2 |
| n-terminus of esterase_sgnh_hydro-type | SAMN05444145_10360 | Not Available | Negative | 1240822 - 1241877 | 39355.9 |
| glucokinase | SAMN05444145_10361 | Not Available | Negative | 1241981 - 1242985 | 35886.1 |
| geranylgeranyl diphosphate synthase, type ii | SAMN05444145_10362 | Not Available | Positive | 1243103 - 1244074 | 35925.6 |
| collagenase. unknown type peptidase. merops family u32 | SAMN05444145_10363 | Not Available | Positive | 1244078 - 1245337 | 45453.4 |
| predicted acyltransferase | SAMN05444145_10364 | Not Available | Positive | 1245340 - 1246470 | 41890.2 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05444145_10365 | Not Available | Positive | 1246482 - 1247900 | 49604.9 |
| muramoyltetrapeptide carboxypeptidase | SAMN05444145_10366 | Not Available | Positive | 1247897 - 1248892 | 36120.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
