Alistipes sp. CHKCI003

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. CHKCI003 is a Gram-negative bacterium distinguished by the presence of flagella, which suggests motility. This characteristic can play a crucial role in its ecological interactions, allowing it to navigate its environment effectively. The organism has a single replicon, indicating a streamlined genomic structure, which may influence its replication and metabolic processes. The accession number for Alistipes sp. CHKCI003 is FCNT00000000.1, providing a reference for further genetic and genomic studies. The significance of Alistipes species in various ecological niches is notable, as they are often associated with the human gut microbiome and have been implicated in different metabolic processes. Understanding the traits of Alistipes sp. CHKCI003 contributes to a broader comprehension of its potential role in the microbiome, particularly in terms of its motility and genomic structure. These features may play a role in its adaptability and interactions within complex microbial communities. The presence of flagella may enable this bacterium to engage in competitive dynamics with other microorganisms, highlighting its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. CHKCI003
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. CHKCI003


Gene Summary

Adenine Count

591395 bp

Thymine Count

585512 bp

Guanine Count

847187 bp

Cytosine Count

845718 bp

Genome Length

2869882 bp

Protein-coding Genes

2478 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease atp-binding subunit clpxBN3659_02464Not AvailablePositive2767086 - 276837847724.6
transketolaseBN3659_02465Not AvailablePositive2768431 - 277046173859.1
hypothetical proteinBN3659_02466Not AvailableNegative2770751 - 277109812539.0
s-adenosylmethionine synthaseBN3659_02467Not AvailableNegative2771301 - 277259647444.5
hypothetical proteinBN3659_02468Not AvailableNegative2772694 - 277334423190.7
putative periplasmic serine endoprotease degp-like precursorBN3659_02469Not AvailablePositive2773378 - 277482951965.0
rna polymerase sigma factor sigaBN3659_02470Not AvailablePositive2774945 - 277580532669.1
modification methylase mboiiBN3659_02471Not AvailableNegative2775943 - 277695938610.3
tsp45i type ii restriction enzymeBN3659_02472Not AvailableNegative2776956 - 277773829748.9
uracil-dna glycosylaseBN3659_02473Not AvailableNegative2777766 - 277842824644.6

Displaying genes 2471 – 2480 of 2558 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.