Alistipes sp. CHKCI003

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. CHKCI003 is a Gram-negative bacterium distinguished by the presence of flagella, which suggests motility. This characteristic can play a crucial role in its ecological interactions, allowing it to navigate its environment effectively. The organism has a single replicon, indicating a streamlined genomic structure, which may influence its replication and metabolic processes. The accession number for Alistipes sp. CHKCI003 is FCNT00000000.1, providing a reference for further genetic and genomic studies. The significance of Alistipes species in various ecological niches is notable, as they are often associated with the human gut microbiome and have been implicated in different metabolic processes. Understanding the traits of Alistipes sp. CHKCI003 contributes to a broader comprehension of its potential role in the microbiome, particularly in terms of its motility and genomic structure. These features may play a role in its adaptability and interactions within complex microbial communities. The presence of flagella may enable this bacterium to engage in competitive dynamics with other microorganisms, highlighting its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. CHKCI003
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. CHKCI003 isolate CHKC3 genome assembly, contig:

Gene Summary

Adenine Count

591395 bp

Thymine Count

585512 bp

Guanine Count

847187 bp

Cytosine Count

845718 bp

Genome Length

2869882 bp

Protein-coding Genes

2478 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative dmt superfamily transporter inner membrane proteinBN3659_02134Not AvailableNegative2375829 - 237675834116.3
50s ribosomal protein l9BN3659_02135Not AvailableNegative2377481 - 237792115544.9
30s ribosomal protein s18BN3659_02136Not AvailableNegative2377940 - 237822110836.4
30s ribosomal protein s6BN3659_02137Not AvailableNegative2378225 - 237856913280.8
thiamine-monophosphate kinaseBN3659_02138Not AvailableNegative2378653 - 237969937387.9
adenylate kinaseBN3659_02139Not AvailablePositive2379794 - 238036921498.8
hypothetical proteinBN3659_02140Not AvailablePositive2380860 - 23810788158.67
hypothetical proteinBN3659_02141Not AvailablePositive2381124 - 238187025458.5
endonuclease yhcr precursorBN3659_02142Not AvailableNegative2381753 - 238316552063.9
uridine kinaseBN3659_02143Not AvailablePositive2383247 - 238492063328.0

Displaying genes 2141 – 2150 of 2558 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.