Alistipes sp. CHKCI003

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. CHKCI003 is a Gram-negative bacterium distinguished by the presence of flagella, which suggests motility. This characteristic can play a crucial role in its ecological interactions, allowing it to navigate its environment effectively. The organism has a single replicon, indicating a streamlined genomic structure, which may influence its replication and metabolic processes. The accession number for Alistipes sp. CHKCI003 is FCNT00000000.1, providing a reference for further genetic and genomic studies. The significance of Alistipes species in various ecological niches is notable, as they are often associated with the human gut microbiome and have been implicated in different metabolic processes. Understanding the traits of Alistipes sp. CHKCI003 contributes to a broader comprehension of its potential role in the microbiome, particularly in terms of its motility and genomic structure. These features may play a role in its adaptability and interactions within complex microbial communities. The presence of flagella may enable this bacterium to engage in competitive dynamics with other microorganisms, highlighting its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. CHKCI003
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. CHKCI003 isolate CHKC3 genome assembly, contig:

Gene Summary

Adenine Count

591395 bp

Thymine Count

585512 bp

Guanine Count

847187 bp

Cytosine Count

845718 bp

Genome Length

2869882 bp

Protein-coding Genes

2478 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna primaseBN3659_02114Not AvailableNegative2350839 - 235281574066.7
ribosomal rna small subunit methyltransferase aBN3659_02115Not AvailableNegative2353204 - 235400429671.0
hypothetical proteinBN3659_02116Not AvailableNegative2354814 - 23550328522.74
hypothetical proteinBN3659_02117Not AvailableNegative2355224 - 23554458631.82
atp-dependent dna helicase recqBN3659_02118Not AvailableNegative2355558 - 235775082147.6
lipopolysaccharide export system atp-binding protein lptbBN3659_02119Not AvailablePositive2357858 - 235863429148.3
3-phosphoshikimate 1-carboxyvinyltransferaseBN3659_02120Not AvailablePositive2359117 - 236036143648.6
chorismate synthaseBN3659_02121Not AvailablePositive2360349 - 236132933730.9
hypothetical proteinBN3659_02122Not AvailableNegative2361319 - 236204426831.1
hypothetical proteinBN3659_02123Not AvailablePositive2363191 - 236559090569.0

Displaying genes 2121 – 2130 of 2558 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.