Alistipes sp. CHKCI003

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. CHKCI003 is a Gram-negative bacterium distinguished by the presence of flagella, which suggests motility. This characteristic can play a crucial role in its ecological interactions, allowing it to navigate its environment effectively. The organism has a single replicon, indicating a streamlined genomic structure, which may influence its replication and metabolic processes. The accession number for Alistipes sp. CHKCI003 is FCNT00000000.1, providing a reference for further genetic and genomic studies. The significance of Alistipes species in various ecological niches is notable, as they are often associated with the human gut microbiome and have been implicated in different metabolic processes. Understanding the traits of Alistipes sp. CHKCI003 contributes to a broader comprehension of its potential role in the microbiome, particularly in terms of its motility and genomic structure. These features may play a role in its adaptability and interactions within complex microbial communities. The presence of flagella may enable this bacterium to engage in competitive dynamics with other microorganisms, highlighting its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. CHKCI003
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. CHKCI003 isolate CHKC3 genome assembly, contig:

Gene Summary

Adenine Count

591395 bp

Thymine Count

585512 bp

Guanine Count

847187 bp

Cytosine Count

845718 bp

Genome Length

2869882 bp

Protein-coding Genes

2478 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-trpNot AvailableNot AvailablePositive1781774 - 1781844Not Available
preprotein translocase subunit seceBN3659_01646Not AvailablePositive1781866 - 17820637317.02
hypothetical proteinBN3659_01647Not AvailablePositive1782081 - 178264121188.5
50s ribosomal protein l11BN3659_01648Not AvailablePositive1782658 - 178309815784.4
50s ribosomal protein l1BN3659_01649Not AvailablePositive1783105 - 178380324751.3
50s ribosomal protein l10BN3659_01650Not AvailablePositive1783821 - 178434519150.2
50s ribosomal protein l7/l12BN3659_01651Not AvailablePositive1784385 - 178476212778.4
dna-directed rna polymerase subunit betaBN3659_01652Not AvailablePositive1785011 - 1788871143877.0
dna-directed rna polymerase subunit beta'BN3659_01653Not AvailablePositive1788910 - 1793172157617.0
transposase dde domain proteinBN3659_01654Not AvailablePositive1793441 - 179487156100.2

Displaying genes 1651 – 1660 of 2558 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.