Alistipes sp. CHKCI003

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. CHKCI003 is a Gram-negative bacterium distinguished by the presence of flagella, which suggests motility. This characteristic can play a crucial role in its ecological interactions, allowing it to navigate its environment effectively. The organism has a single replicon, indicating a streamlined genomic structure, which may influence its replication and metabolic processes. The accession number for Alistipes sp. CHKCI003 is FCNT00000000.1, providing a reference for further genetic and genomic studies. The significance of Alistipes species in various ecological niches is notable, as they are often associated with the human gut microbiome and have been implicated in different metabolic processes. Understanding the traits of Alistipes sp. CHKCI003 contributes to a broader comprehension of its potential role in the microbiome, particularly in terms of its motility and genomic structure. These features may play a role in its adaptability and interactions within complex microbial communities. The presence of flagella may enable this bacterium to engage in competitive dynamics with other microorganisms, highlighting its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. CHKCI003
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. CHKCI003 isolate CHKC3 genome assembly, contig:

Gene Summary

Adenine Count

591395 bp

Thymine Count

585512 bp

Guanine Count

847187 bp

Cytosine Count

845718 bp

Genome Length

2869882 bp

Protein-coding Genes

2478 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2, 4-dienoic acid hydrolaseBN3659_01554Not AvailableNegative1680125 - 168100331757.1
hypothetical proteinBN3659_01555Not AvailableNegative1681010 - 16812108057.33
diaminopimelate epimeraseBN3659_01556Not AvailableNegative1681247 - 168205329043.1
nadph-dependent oxidoreductaseBN3659_01557Not AvailablePositive1682143 - 168288928076.5
outer membrane protein assembly factor bama precursorBN3659_01558Not AvailablePositive1682895 - 168527091289.5
arabinose operon regulatory proteinBN3659_01559Not AvailableNegative1685911 - 168683135147.5
chaperone protein skp precursorBN3659_01560Not AvailableNegative1687004 - 168758521520.7
periplasmic chaperoneBN3659_01561Not AvailableNegative1687624 - 168813018722.3
outer membrane protein assembly factor bama precursorBN3659_01562Not AvailableNegative1688238 - 169082097630.9
ditrans,polycis-undecaprenyl-diphosphate synthase ((2e,6e)-farnesyl-diphosphate specific)BN3659_01563Not AvailableNegative1690804 - 169155628458.6

Displaying genes 1561 – 1570 of 2558 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.