Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | J-07 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1148956 bp
Thymine Count
1155651 bp
Guanine Count
1672331 bp
Cytosine Count
1656030 bp
Genome Length
5632968 bp
Protein-coding Genes
5519 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock protein, dna binding | AGR8A_Cc30200 | Not Available | Negative | 339175 - 339390 | 7470.77 |
| hypothetical protein | AGR8A_Cc30201 | Not Available | Positive | 339298 - 339477 | 6321.4 |
| permease | AGR8A_Cc30202 | Not Available | Negative | 339836 - 340738 | 32168.3 |
| hypothetical exported hypothetical protein | AGR8A_Cc30203 | Not Available | Negative | 340894 - 341205 | 10972.5 |
| putative diguanylate phosphodiesterase | AGR8A_Cc30204 | Not Available | Negative | 341353 - 342279 | 34747.3 |
| aspartate aminotransferase a (aspat) | AGR8A_Cc30205 | Not Available | Positive | 342491 - 343693 | 43539.1 |
| ca2+/h+ antiporter | AGR8A_Cc30206 | Not Available | Negative | 343753 - 344859 | 39013.8 |
| conserved hypothetical protein | AGR8A_Cc30207 | Not Available | Negative | 344841 - 345062 | 8287.01 |
| conserved hypothetical protein | AGR8A_Cc30208 | Not Available | Positive | 345055 - 345321 | 9895.12 |
| putative transcriptional regulator, lysr family | AGR8A_Cc30209 | Not Available | Negative | 345651 - 346595 | 34643.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

