Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | J-07 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1148956 bp
Thymine Count
1155651 bp
Guanine Count
1672331 bp
Cytosine Count
1656030 bp
Genome Length
5632968 bp
Protein-coding Genes
5519 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dihydrodipicolinate synthase | AGR8A_Cc10037 | Not Available | Negative | 39995 - 40879 | 31203.4 |
| heme oxygenase-like protein | AGR8A_Cc10038 | Not Available | Positive | 41184 - 41798 | 22477.7 |
| pyrimidine monooxygenase ruta, monooxygenase of the alternative pyrimidine degradation pathway | AGR8A_Cc10039 | Not Available | Positive | 42202 - 43293 | 39842.6 |
| peroxyureidoacrylate/ureidoacrylate amidohydrolase rutb, enzyme of the alternative pyrimidine degradation pathway | AGR8A_Cc10040 | Not Available | Positive | 43290 - 44030 | 26796.7 |
| enzyme of the alternative pyrimidine degradation pathway | AGR8A_Cc10041 | Not Available | Positive | 44057 - 44443 | 13745.5 |
| enzyme of the alternative pyrimidine degradation pathway | AGR8A_Cc10042 | Not Available | Positive | 44457 - 45248 | 28859.7 |
| putative malonic semialdehyde reductase rute | AGR8A_Cc10043 | Not Available | Positive | 45245 - 45856 | 21907.1 |
| flavin:nadh oxidoreductase subunit of alternative pyrimidine degradation pathway | AGR8A_Cc10044 | Not Available | Positive | 45898 - 46422 | 18666.4 |
| nad(p)+ transhydrogenase beta chain | AGR8A_Cc10045 | Not Available | Negative | 46526 - 47971 | 50095.8 |
| nad(p) transhydrogenase subunit alpha | AGR8A_Cc10046 | Not Available | Negative | 47992 - 49566 | 55913.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

