Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | J-07 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1148956 bp
Thymine Count
1155651 bp
Guanine Count
1672331 bp
Cytosine Count
1656030 bp
Genome Length
5632968 bp
Protein-coding Genes
5519 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconate dehydrogenase, decarboxylating | AGR8A_Cc40118 | Not Available | Positive | 1045945 - 1047375 | 51268.6 |
| hypothetical protein | AGR8A_Cc40119 | Not Available | Positive | 1047170 - 1047820 | 23114.6 |
| conserved exported hypothetical protein | AGR8A_Cc40120 | Not Available | Negative | 1047443 - 1047769 | 12697.5 |
| aldo-keto reductase | AGR8A_Cc40121 | Not Available | Negative | 1047961 - 1048992 | 38101.2 |
| beta-mannosidase | AGR8A_Cc40122 | Not Available | Negative | 1049095 - 1051578 | 93269.9 |
| laci family transcription regulator | AGR8A_Cc40123 | Not Available | Positive | 1052082 - 1053134 | 38333.2 |
| high-affinity zinc uptake system protein znua | AGR8A_Cc40124 | Not Available | Negative | 1053156 - 1054145 | 34924.3 |
| zinc import atp-binding protein znuc | AGR8A_Cc40125 | Not Available | Positive | 1054250 - 1055185 | 33569.7 |
| abc transporter, membrane spanning protein (zinc) | AGR8A_Cc40126 | Not Available | Positive | 1055061 - 1055996 | 32687.5 |
| metal up-take transcriptional regulator, fur family, similar to zinc | AGR8A_Cc40127 | Not Available | Positive | 1055993 - 1056406 | 15401.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

