Alistipes sp. CAG:29

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. CAG:29 is a Gram-negative bacterium characterized by the presence of flagella, which suggests it has the capability for motility. This trait may provide an ecological advantage in various environments, allowing the organism to navigate towards nutrients or away from unfavorable conditions. The bacterium contains a single replicon, indicating a streamlined genetic organization that can be advantageous for its replication and stability. The accession number for Alistipes sp. CAG:29 is CBGS000000000.1, which serves as a unique identifier within genomic databases, facilitating further research and exploration of its genetic and functional characteristics. The presence of flagella in Alistipes sp. CAG:29 may also imply potential interactions with its environment, such as colonization of specific niches or engagement with host organisms, which is a common trait among motile microorganisms. Understanding the motility and genetic traits of Alistipes sp. CAG:29 may provide insights into its ecological roles and potential applications in biotechnology or health-related research. This bacterium could be involved in complex interactions within microbial communities, highlighting the importance of motility and genetic organization in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. CAG:29
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. CAG:29 WGS project CBGS01000000 data, contig, whole

Gene Summary

Adenine Count

642150 bp

Thymine Count

647546 bp

Guanine Count

924275 bp

Cytosine Count

908753 bp

Genome Length

3122790 bp

Protein-coding Genes

2584 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized proteinBN590_00790Not AvailablePositive2780754 - 278326794217.9
site-specific recombinase phage integrase familyBN590_00791Not AvailableNegative2783898 - 278535256240.7
dna-binding domain-containing protein arac-typeBN590_00792Not AvailableNegative2785535 - 278645835094.2
lipid kinase yegs/rv2252/bmru familyBN590_00793Not AvailableNegative2786566 - 278743831554.3
membrane-associated lipoprotein involved in thiamine biosynthesisBN590_00794Not AvailableNegative2787446 - 278845636433.7
glucose-1-phosphate thymidylyltransferaseBN590_00795Not AvailablePositive2788822 - 27890649192.1
dtdp-4-dehydrorhamnose 3 5-epimeraseBN590_00796Not AvailablePositive2789069 - 278964121319.1
dtdp-4-dehydrorhamnose reductaseBN590_00797Not AvailablePositive2789972 - 279065225219.7
transcriptional regulatory protein rpryBN590_00798Not AvailableNegative2790871 - 279156025431.0
two-component system sensor histidine kinaseBN590_00799Not AvailableNegative2791550 - 279307356463.3

Displaying genes 2351 – 2360 of 2622 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

66 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001514Fe(III)-enterobactinC30H21FeN3O15Chemical structure of Fe(III)-enterobactinNot available
Average719.344Da
Monoisotopic719.0322092Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da
BASm0002232(2E,4Z)-5-hydroxypenta-2,4-diene-1,2,5-tricarboxylateC8H5O7Chemical structure of (2E,4Z)-5-hydroxypenta-2,4-diene-1,2,5-tricarboxylateNot available
Average213.123Da
Monoisotopic213.005173241Da

Displaying 1–10 of 66 metabolites

Health Effects

No health effects information available for this bacterium.