Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2995 | Not Available | Positive | 1095980 - 1096480 | 19038.3 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_2996 | Not Available | Positive | 1096652 - 1097653 | 37779.6 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_2997 | Not Available | Positive | 1097774 - 1101289 | 132104.0 |
| susd family protein | HMPREF9720_2998 | Not Available | Positive | 1101306 - 1103078 | 67547.4 |
| endonuclease/exonuclease/phosphatase family protein | HMPREF9720_2999 | Not Available | Positive | 1103112 - 1104011 | 32830.3 |
| hypothetical protein | HMPREF9720_3000 | Not Available | Positive | 1104037 - 1105098 | 39419.7 |
| rna polymerase sigma-70 factor | HMPREF9720_3001 | Not Available | Positive | 1105322 - 1105843 | 20134.3 |
| putative s-adenosylmethionine:trna ribosyltransferase-isomerase | HMPREF9720_3002 | Not Available | Negative | 1105966 - 1107177 | 45923.0 |
| f5/8 type c domain protein | HMPREF9720_3003 | Not Available | Negative | 1107327 - 1108286 | 34453.8 |
| hypothetical protein | HMPREF9720_3004 | Not Available | Negative | 1108371 - 1109540 | 41856.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
