Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein ured | HMPREF9720_2985 | Not Available | Negative | 1086904 - 1087818 | 34683.3 |
| urease accessory protein ureg | HMPREF9720_2986 | Not Available | Negative | 1087815 - 1088486 | 24221.4 |
| urease accessory protein uref | HMPREF9720_2987 | Not Available | Negative | 1088527 - 1089219 | 25407.4 |
| putative urease accessory protein uree | HMPREF9720_2988 | Not Available | Negative | 1089230 - 1089805 | 21872.1 |
| urease, alpha subunit | HMPREF9720_2989 | Not Available | Negative | 1089946 - 1091664 | 61702.8 |
| urease, beta subunit | HMPREF9720_2990 | Not Available | Negative | 1091670 - 1092197 | 19325.1 |
| urease, gamma subunit | HMPREF9720_2991 | Not Available | Negative | 1092215 - 1092517 | 10981.7 |
| protein crcb | HMPREF9720_2992 | Not Available | Positive | 1092736 - 1093113 | 13668.2 |
| phosphopyruvate hydratase | HMPREF9720_2993 | Not Available | Negative | 1093255 - 1094556 | 46589.5 |
| hypothetical protein | HMPREF9720_2994 | Not Available | Positive | 1094647 - 1095936 | 47373.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
