Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2149 | Not Available | Negative | 1072522 - 1073076 | 20748.1 |
| hypothetical protein | HMPREF9720_2150 | Not Available | Negative | 1074848 - 1075891 | 39710.6 |
| hypothetical protein | HMPREF9720_2151 | Not Available | Negative | 1076338 - 1076663 | 12108.1 |
| inosine-uridine preferring nucleoside hydrolase | HMPREF9720_2978 | Not Available | Negative | 1077664 - 1079142 | 53199.6 |
| tonb-dependent receptor | HMPREF9720_2979 | Not Available | Negative | 1079157 - 1081043 | 69394.7 |
| transporter, major facilitator family protein | HMPREF9720_2980 | Not Available | Positive | 1081231 - 1083195 | 71678.8 |
| cobalt abc transporter, atp-binding protein | HMPREF9720_2981 | Not Available | Negative | 1083199 - 1083960 | 28178.4 |
| cobalt abc transporter, permease protein cbiq | HMPREF9720_2982 | Not Available | Negative | 1083962 - 1084777 | 30700.6 |
| cobalamin biosynthesis protein cbim | HMPREF9720_2983 | Not Available | Negative | 1084774 - 1085766 | 34546.0 |
| urea transporter | HMPREF9720_2984 | Not Available | Negative | 1085829 - 1086872 | 37452.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
