Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2139 | Not Available | Positive | 1064292 - 1064906 | 23557.4 |
| hypothetical protein | HMPREF9720_2140 | Not Available | Positive | 1065366 - 1065557 | 7553.31 |
| putative conjugative transposon tram protein | HMPREF9720_2141 | Not Available | Positive | 1065535 - 1066632 | 39753.8 |
| hypothetical protein | HMPREF9720_2142 | Not Available | Positive | 1066660 - 1067517 | 32613.0 |
| fic family protein | HMPREF9720_2143 | Not Available | Negative | 1067657 - 1068550 | 34496.2 |
| hypothetical protein | HMPREF9720_2144 | Not Available | Positive | 1069086 - 1069271 | 6926.7 |
| c-5 cytosine-specific dna methylase | HMPREF9720_2145 | Not Available | Negative | 1069663 - 1071411 | 64953.7 |
| hypothetical protein | HMPREF9720_2146 | Not Available | Negative | 1071505 - 1071732 | 9161.81 |
| hypothetical protein | HMPREF9720_2147 | Not Available | Negative | 1071770 - 1071991 | 8719.62 |
| hypothetical protein | HMPREF9720_2148 | Not Available | Negative | 1071978 - 1072505 | 20961.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
