Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha amylase, catalytic domain protein | HMPREF9720_2079 | Not Available | Positive | 1004908 - 1007226 | 84490.9 |
| alpha amylase, catalytic domain protein | HMPREF9720_2080 | Not Available | Positive | 1007267 - 1008574 | 49153.8 |
| alpha amylase, catalytic domain protein | HMPREF9720_2081 | Not Available | Positive | 1008899 - 1010650 | 66166.7 |
| hypothetical protein | HMPREF9720_2082 | Not Available | Positive | 1010663 - 1012858 | 82961.6 |
| hypothetical protein | HMPREF9720_2083 | Not Available | Negative | 1013109 - 1013867 | 29202.2 |
| relaxase/mobilization nuclease domain protein | HMPREF9720_2084 | Not Available | Negative | 1013892 - 1014962 | 39674.8 |
| bacterial mobilization protein mobc | HMPREF9720_2085 | Not Available | Negative | 1014952 - 1015320 | 13637.0 |
| hypothetical protein | HMPREF9720_2086 | Not Available | Negative | 1015589 - 1016446 | 31678.1 |
| hypothetical protein | HMPREF9720_2087 | Not Available | Negative | 1016630 - 1017850 | 47715.2 |
| hypothetical protein | HMPREF9720_2088 | Not Available | Negative | 1017840 - 1017953 | 4418.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
