Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_0359 | Not Available | Positive | 991553 - 991714 | 5921.19 |
| site-specific recombinase, phage integrase family | HMPREF9720_3011 | Not Available | Positive | 992009 - 993175 | 44877.2 |
| hypothetical protein | HMPREF9720_2071 | Not Available | Positive | 993176 - 994157 | 38025.3 |
| lyttr dna-binding domain protein | HMPREF9720_2072 | Not Available | Negative | 994532 - 995284 | 28677.5 |
| histidine kinase | HMPREF9720_2073 | Not Available | Negative | 995286 - 996053 | 29080.6 |
| hypothetical protein | HMPREF9720_2074 | Not Available | Negative | 996100 - 996675 | 20778.9 |
| transporter, major facilitator family protein | HMPREF9720_2075 | Not Available | Positive | 996898 - 998205 | 46903.2 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_2076 | Not Available | Positive | 998249 - 1001290 | 111896.0 |
| susd family protein | HMPREF9720_2077 | Not Available | Positive | 1001304 - 1002962 | 61122.3 |
| hypothetical protein | HMPREF9720_2078 | Not Available | Positive | 1002986 - 1004800 | 64717.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
